Research Data Leeds Repository

Citation

Chau, Chalmers C. and Marcuccio, Fabio and Soulias, Dimitrios and Edwards, Martin A. and Tuplin, Andrew and Radford, Sheena E. and Hewitt, Eric W. and Actis, Paolo (2022) Data set for Probing RNA conformations using a polymer electrolyte solid-state nanopore. University of Leeds. [Dataset] https://doi.org/10.5518/1251

Dataset description

The data set contains all ionic current traces recorded using pClamp system for the associated paper The data is in the native pClamp format of abf files. The data set is aim to allow users to re-analysis the data and to reproduce the observations made in the assocaited publication.

Keywords:	Nanopore, Polymer electrolyte, Current Traces
Subjects:	H000 - Engineering > H600 - Electronic & electrical engineering C000 - Biological sciences > C700 - Molecular biology, biophysics & biochemistry
Divisions:	Faculty of Biological Sciences > Astbury Centre for Structural Molecular Biology Faculty of Engineering and Physical Sciences > School of Electronic and Electrical Engineering
Related resources:	Location Type https://doi.org/10.1021/acsnano.2c08312 Publication https://eprints.whiterose.ac.uk/192850/ Publication
License:	Creative Commons Attribution 4.0 International (CC BY 4.0)
Date deposited:	25 Oct 2022 11:59
URI:	https://archive.researchdata.leeds.ac.uk/id/eprint/1036
Additional details Additional details Creators or authors: Creators ORCID Other ID Email Primary affiliation Primary affiliation ID Primary affiliation ID type Secondary affiliation Secondary affiliation ID Secondary affiliation ID type Chau, Chalmers C. https://orcid.org/0000-0002-3134-6798 University of Leeds https://ror.org/024mrxd33 ror Marcuccio, Fabio https://orcid.org/0000-0003-4816-2896 University of Leeds https://ror.org/024mrxd33 ror Soulias, Dimitrios https://orcid.org/0000-0003-4700-6744 University of Leeds https://ror.org/024mrxd33 ror Edwards, Martin A. https://orcid.org/0000-0001-8072-361X University of Arkansas https://ror.org/05jbt9m15 ror Tuplin, Andrew https://orcid.org/0000-0003-2524-707X University of Leeds https://ror.org/024mrxd33 ror Radford, Sheena E. https://orcid.org/0000-0002-3079-8039 University of Leeds https://ror.org/024mrxd33 ror Hewitt, Eric W. https://orcid.org/0000-0002-6238-6303 University of Leeds https://ror.org/024mrxd33 ror Actis, Paolo https://orcid.org/0000-0002-7146-1854 University of Leeds https://ror.org/024mrxd33 ror Type of data: Dataset Research funders: Engineering and Physical Science Research Council (EPSRC), Marie Skłodowska-Curie MSCA-ITN. Single-Entity NanoElectrochemistry, SENTINEL project, Medical Research Council, Royal Society Professorial Fellowship, University of Leeds Grant numbers: EP/W004933/1, 812398, MR/N01054X/1, RSRP\R1\211057 Publication date: 2022 Resource language: English Metadata language: English Publisher: University of Leeds Contact email: p.actis@leeds.ac.uk Last Modified: 03 Sep 2024 08:07

Files

Documentation

Readme [3kB] Readme [3kB] Readme [3kB] Security: Anyone File name: README_Chau_2022.txt Content type: Documentation Description: For overview of the data set Mime-Type: text/plain License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 3kB

Data

Main figure data [80MB] Main figure data [80MB] Main figure data [80MB] Security: Anyone File name: Figure_1_effects_of_PEG_molecular_weight_on_analyte_translocation_behaviour.zip Content type: Data Description: Data for main figure 1 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 80MB

Main figure data [126MB] Main figure data [126MB] Main figure data [126MB] Security: Anyone File name: Figure_2_bath_electrolyte_dominates_properties_of_translocation_peaks.zip Content type: Data Description: Data for main figure 2 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 126MB

Main figure data [313MB] Main figure data [313MB] Main figure data [313MB] Security: Anyone File name: Figure_3_influences_of_the_type_of_electrolytes.zip Content type: Data Description: Data for main figure 3 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 313MB

Main figure data [67MB] Main figure data [67MB] Main figure data [67MB] Security: Anyone File name: Figure_4_detection_of_RNA_fragments_with_polymer_electrolyte_nanopore_system.zip Content type: Data Description: Data for main figure 4 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 67MB

Main figure data [66MB] Main figure data [66MB] Main figure data [66MB] Security: Anyone File name: Figure_5_discrimination_between_co-transcriptionally_and_natively_refolded_RNA.zip Content type: Data Description: Data for main figure 5 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 66MB

Supporting figure data [97MB] Supporting figure data [97MB] Supporting figure data [97MB] Security: Anyone File name: Supporting_Figure_4_translocation_control.zip Content type: Data Description: Data for supporting figure 4 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 97MB

Supporting figure data [85MB] Supporting figure data [85MB] Supporting figure data [85MB] Security: Anyone File name: Supporting_Figure_5_low-pass_filter_comparison.zip Content type: Data Description: Data for supporting figure 5 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 85MB

Supporting figure data [316MB] Supporting figure data [316MB] Supporting figure data [316MB] Security: Anyone File name: Supporting_Figure_6_analyte_translocation_without_low-pass_filter.zip Content type: Data Description: Data for supporting figure 6 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 316MB

Supporting figure data [275MB] Supporting figure data [275MB] Supporting figure data [275MB] Security: Anyone File name: Supporting_Figure_7_capture_rate_comparison.zip Content type: Data Description: Data for supporting figure 7 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 275MB

Supporting figure data [65MB] Supporting figure data [65MB] Supporting figure data [65MB] Security: Anyone File name: Supporting_Figure_12_500_bp_dsDNA_traces.zip Content type: Data Description: Data for supporting figure 12 Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 65MB