Research Data Leeds Repository

DeSeq2 output comparing the total RNA sequencing gene expression data of paired patient derived Ewing sarcoma and Ewing sarcoma CSCs.

Citation

Burchill, Susan and Roundhill, Elizabeth (2021) DeSeq2 output comparing the total RNA sequencing gene expression data of paired patient derived Ewing sarcoma and Ewing sarcoma CSCs. University of Leeds. [Dataset] https://doi.org/10.5518/886¹

Dataset description

List of differentially expressed genes comparing the total RNA sequencing data from paired patient derived Ewing sarcoma and Ewing sarcoma CSCs using DeSeq2.

Additional information:	This dataset is held in the Restricted Access Data Repository, RADAR. To request access, please click the link under ‘Related resources’. You will be prompted to complete a request form including your intended use of the dataset. You will then receive an initial response to your request within 10 working days.
Keywords:	Ewing sarcoma, ES-CSCs, RNA sequencing
Subjects:	C000 - Biological sciences > C400 - Genetics > C440 - Molecular genetics > C441 - Transcriptomics2
Divisions:	Faculty of Medicine and Health > School of Medicine3
Related resources:	Location Type https://doi.org/10.1007/s13402-021-00619-84 Publication https://eprints.whiterose.ac.uk/177209/5 Publication https://radar.researchdata.leeds.ac.uk/74/6 Dataset
License:	Creative Commons Attribution 4.0 International (CC BY 4.0)
Date deposited:	09 Aug 2021 14:28
URI:	https://archive.researchdata.leeds.ac.uk/id/eprint/8787
Additional details Additional details Creators or authors: Creators ORCID Other ID Email Primary affiliation Primary affiliation ID Primary affiliation ID type Secondary affiliation Secondary affiliation ID Secondary affiliation ID type Burchill, Susan https://orcid.org/0000-0002-1034-37238 University of Leeds https://ror.org/024mrxd33 ror Roundhill, Elizabeth https://orcid.org/0000-0002-0508-36489 University of Leeds https://ror.org/024mrxd33 ror Type of data: Dataset Research funders: Ewing Sarcoma Research Trust, Bone Cancer Research Trust, FP7 grant "EURO EWING Consortium", University of Leeds PhD studentship Grant numbers: FP7 grant "EURO EWING Consortium" no.602856. Publication date: 2021 Data collection method: Total RNA sequencing and differential expression analysis using DeSeq2. Legal and ethical issues: Consent has been given from all patients included in this study Resource language: English Metadata language: English Publisher: University of Leeds Contact email: s.a.burchill@leeds.ac.uk10 Last Modified: 20 Jun 2025 17:12

Files

Data

differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv [45kB] 11 differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv [45kB] 12 differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv [45kB] 13 Security: Anyone File name: differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv14 Content type: Data Mime-Type: text/csv License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 45kB

• 1. https://doi.org/10.5518/886
• 2. https://archive.researchdata.leeds.ac.uk/view/subjects/C441.html
• 3. https://archive.researchdata.leeds.ac.uk/view/divisions/SOM/
• 4. https://doi.org/10.1007/s13402-021-00619-8
• 5. https://eprints.whiterose.ac.uk/177209/
• 6. https://radar.researchdata.leeds.ac.uk/74/
• 7. https://archive.researchdata.leeds.ac.uk/id/eprint/878
• 8. https://orcid.org/0000-0002-1034-3723
• 9. https://orcid.org/0000-0002-0508-3648
• 10. mailto:s.a.burchill@leeds.ac.uk
• 11. https://archive.researchdata.leeds.ac.uk/878/1/differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv
• 12. https://archive.researchdata.leeds.ac.uk/878/1/differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv
• 13. https://archive.researchdata.leeds.ac.uk/878/1/differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv
• 14. https://archive.researchdata.leeds.ac.uk/878/1/differential_expression_analysis_comparing_paired_ES_and_ES-CSC.csv