Research Data Leeds Repository

The fishPy tool: An individual-based model to predict upstream movements of brown trout (Salmo trutta)

Citation

Padgett, Thomas (2020) The fishPy tool: An individual-based model to predict upstream movements of brown trout (Salmo trutta). University of Leeds. [Dataset] https://doi.org/10.5518/861¹

Dataset description

The fishPy tool is a three-dimensional, spatially-continuous, individual-based model of fish responses to hydraulic stimuli during upstream migration through ecohydraulic environments.

Divisions:	Faculty of Engineering and Physical Sciences > Centre for Computational Fluid Dynamics2
Related resources:	Location Type https://etheses.whiterose.ac.uk/28307/3 Ethesis
License:	Creative Commons Attribution 4.0 International (CC BY 4.0)
Date deposited:	13 Oct 2020 07:58
URI:	https://archive.researchdata.leeds.ac.uk/id/eprint/7544
Additional details Additional details Creators or authors: Creators ORCID Other ID Email Primary affiliation Primary affiliation ID Primary affiliation ID type Secondary affiliation Secondary affiliation ID Secondary affiliation ID type Padgett, Thomas https://orcid.org/0000-0001-8396-29315 University of Leeds https://ror.org/024mrxd33 ror Type of data: Dataset Publication date: 2020 Resource language: English Metadata language: English Publisher: University of Leeds Contact email: ed10tep@leeds.ac.uk6 Last Modified: 16 Jul 2024 10:44

Files

Documentation

readme.txt [918B] 7 readme.txt [918B] 8 readme.txt [918B] 9 Security: Anyone File name: readme.txt10 Content type: Documentation Description: Read me file (instructions) Mime-Type: text/plain License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 918B

mit_licence.txt [1kB] 11 mit_licence.txt [1kB] 12 mit_licence.txt [1kB] 13 Security: Anyone File name: mit_licence.txt14 Content type: Documentation Mime-Type: text/plain License: MIT License File size: 1kB

Data

domains.zip [57MB] 15 domains.zip [57MB] 16 domains.zip [57MB] 17 Security: Anyone File name: domains.zip18 Content type: Data Description: Compressed folder containing example domain files to be used as inputs for the fishPy tool. Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 57MB

outputs.zip [22kB] 19 outputs.zip [22kB] 20 outputs.zip [22kB] 21 Security: Anyone File name: outputs.zip22 Content type: Data Description: Compressed folder containing example output files from the fishPy tool. Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 22kB

OF2fishPy.zip [445MB] 23 OF2fishPy.zip [445MB] 24 OF2fishPy.zip [445MB] 25 Security: Anyone File name: OF2fishPy.zip26 Content type: Data Description: Compressed folder containing scripts required to convert an OpenFOAM CFD output into a fishPy input file. Mime-Type: application/zip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 445MB

Program

The fishPy tool [81kB] 27 The fishPy tool [81kB] 28 The fishPy tool [81kB] 29 Security: Anyone File name: fishPy.py30 Content type: Program Description: The fishPy tool is a three-dimensional, spatially-continuous, individual-based model of fish responses to hydraulic stimuli during upstream migration through ecohydraulic environments. File size: 81kB

• 1. https://doi.org/10.5518/861
• 2. https://archive.researchdata.leeds.ac.uk/view/divisions/CCFD/
• 3. https://etheses.whiterose.ac.uk/28307/
• 4. https://archive.researchdata.leeds.ac.uk/id/eprint/754
• 5. https://orcid.org/0000-0001-8396-2931
• 6. mailto:ed10tep@leeds.ac.uk
• 7. https://archive.researchdata.leeds.ac.uk/754/5/readme.txt
• 8. https://archive.researchdata.leeds.ac.uk/754/5/readme.txt
• 9. https://archive.researchdata.leeds.ac.uk/754/5/readme.txt
• 10. https://archive.researchdata.leeds.ac.uk/754/5/readme.txt
• 11. https://archive.researchdata.leeds.ac.uk/754/7/mit_licence.txt
• 12. https://archive.researchdata.leeds.ac.uk/754/7/mit_licence.txt
• 13. https://archive.researchdata.leeds.ac.uk/754/7/mit_licence.txt
• 14. https://archive.researchdata.leeds.ac.uk/754/7/mit_licence.txt
• 15. https://archive.researchdata.leeds.ac.uk/754/2/domains.zip
• 16. https://archive.researchdata.leeds.ac.uk/754/2/domains.zip
• 17. https://archive.researchdata.leeds.ac.uk/754/2/domains.zip
• 18. https://archive.researchdata.leeds.ac.uk/754/2/domains.zip
• 19. https://archive.researchdata.leeds.ac.uk/754/3/outputs.zip
• 20. https://archive.researchdata.leeds.ac.uk/754/3/outputs.zip
• 21. https://archive.researchdata.leeds.ac.uk/754/3/outputs.zip
• 22. https://archive.researchdata.leeds.ac.uk/754/3/outputs.zip
• 23. https://archive.researchdata.leeds.ac.uk/754/4/OF2fishPy.zip
• 24. https://archive.researchdata.leeds.ac.uk/754/4/OF2fishPy.zip
• 25. https://archive.researchdata.leeds.ac.uk/754/4/OF2fishPy.zip
• 26. https://archive.researchdata.leeds.ac.uk/754/4/OF2fishPy.zip
• 27. https://archive.researchdata.leeds.ac.uk/754/1/fishPy.py
• 28. https://archive.researchdata.leeds.ac.uk/754/1/fishPy.py
• 29. https://archive.researchdata.leeds.ac.uk/754/1/fishPy.py
• 30. https://archive.researchdata.leeds.ac.uk/754/1/fishPy.py