Research Data Leeds Repository

Axonemal Dynein FFEA

Citation

Richardson, Robin A. and Hanson, Benjamin S. and Harris, Sarah A. (2020) Axonemal Dynein FFEA. University of Leeds. [Dataset] https://doi.org/10.5518/836¹

Dataset description

The molecular motor flagellar dynein causes the macroscopic motion of axonemal structures, such as those present in the tails of sperm. However, each motor exists within a tightly packed environment, suspended between two microtubule structures. To simulate those motor in it's crowded environment, and reproduce published results, we present a set of input files to be used with the Fluctuating Finite Element Analysis (FFEA) software package.

Subjects:	F000 - Physical sciences > F300 - Physics > F340 - Mathematical & theoretical physics > F343 - Computational physics2 C000 - Biological sciences > C700 - Molecular biology, biophysics & biochemistry3
Divisions:	Faculty of Engineering and Physical Sciences > School of Physics and Astronomy4
Related resources:	Location Type https://doi.org/10.1017/S00335835200000625 Publication https://eprints.whiterose.ac.uk/164279/6 Publication
License:	Creative Commons Attribution 4.0 International (CC BY 4.0)
Date deposited:	22 Jul 2020 15:00
URI:	https://archive.researchdata.leeds.ac.uk/id/eprint/7117
Additional details Additional details Creators or authors: Creators ORCID Other ID Email Primary affiliation Primary affiliation ID Primary affiliation ID type Secondary affiliation Secondary affiliation ID Secondary affiliation ID type Richardson, Robin A. https://orcid.org/0000-0002-9984-27208 Netherlands eScience Center https://ror.org/00rbjv475 ror Hanson, Benjamin S. https://orcid.org/0000-0002-6079-45069 University of Leeds https://ror.org/024mrxd33 ror Harris, Sarah A. https://orcid.org/0000-0002-2812-165110 University of Leeds https://ror.org/024mrxd33 ror Type of data: Dataset Research funders: EPSRC Grant numbers: DTP/DTA Publication date: 2020 Resource language: English Metadata language: English Publisher: University of Leeds Contact email: s.a.harris@leeds.ac.uk11 Last Modified: 31 Oct 2024 09:51

Files

Documentation

README [2kB] 12 README [2kB] 13 README [2kB] 14 Security: Anyone File name: README.txt15 Content type: Documentation Mime-Type: text/plain License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 2kB

File list [7kB] 16 File list [7kB] 17 File list [7kB] 18 Security: Anyone File name: AxonemalDyneinFFEA_list.txt19 Content type: Documentation Mime-Type: text/plain License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 7kB

Data

FFEA simulation input files [2MB] 20 FFEA simulation input files [2MB] 21 FFEA simulation input files [2MB] 22 Security: Anyone File name: AxonemalDyneinFFEA.tar.gz23 Content type: Data Mime-Type: application/x-gzip License: Creative Commons Attribution 4.0 International (CC BY 4.0) File size: 2MB

• 1. https://doi.org/10.5518/836
• 2. https://archive.researchdata.leeds.ac.uk/view/subjects/F343.html
• 3. https://archive.researchdata.leeds.ac.uk/view/subjects/C700.html
• 4. https://archive.researchdata.leeds.ac.uk/view/divisions/SPA/
• 5. https://doi.org/10.1017/S0033583520000062
• 6. https://eprints.whiterose.ac.uk/164279/
• 7. https://archive.researchdata.leeds.ac.uk/id/eprint/711
• 8. https://orcid.org/0000-0002-9984-2720
• 9. https://orcid.org/0000-0002-6079-4506
• 10. https://orcid.org/0000-0002-2812-1651
• 11. mailto:s.a.harris@leeds.ac.uk
• 12. https://archive.researchdata.leeds.ac.uk/711/2/README.txt
• 13. https://archive.researchdata.leeds.ac.uk/711/2/README.txt
• 14. https://archive.researchdata.leeds.ac.uk/711/2/README.txt
• 15. https://archive.researchdata.leeds.ac.uk/711/2/README.txt
• 16. https://archive.researchdata.leeds.ac.uk/711/3/AxonemalDyneinFFEA_list.txt
• 17. https://archive.researchdata.leeds.ac.uk/711/3/AxonemalDyneinFFEA_list.txt
• 18. https://archive.researchdata.leeds.ac.uk/711/3/AxonemalDyneinFFEA_list.txt
• 19. https://archive.researchdata.leeds.ac.uk/711/3/AxonemalDyneinFFEA_list.txt
• 20. https://archive.researchdata.leeds.ac.uk/711/1/AxonemalDyneinFFEA.tar.gz
• 21. https://archive.researchdata.leeds.ac.uk/711/1/AxonemalDyneinFFEA.tar.gz
• 22. https://archive.researchdata.leeds.ac.uk/711/1/AxonemalDyneinFFEA.tar.gz
• 23. https://archive.researchdata.leeds.ac.uk/711/1/AxonemalDyneinFFEA.tar.gz