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MATLAB code for the analysis of proton transport activity in single liposomes.

Citation

Mengqiu, Li and Tuma, Roman and Jeuken, Lars J.C. (2017) MATLAB code for the analysis of proton transport activity in single liposomes. University of Leeds. [Dataset] https://doi.org/10.5518/150

Dataset description

The code is adapted from the code the authors used to generate the data published in the associated papers. Minor improvements and bug fix have been added since the publication in the Journal of the American Chemical Society. The shared code does not contain all the code the authors used, but forms the basis of the data analysis.  The code is for fitting the time-resolved data (traces) of individual lipid vesicles with the method detailed in the paper. The code for getting the traces from the imaging data is not shared because it is specifically designed for the experimental set-up, but has been described in detail in the paper. Similar functions are available in many other softwares.

Keywords: single-enzyme; heme-copper oxidase; MATLAB; automated analysis; time-trace; cytochrome bo3; proton pumping
Subjects: C000 - Biological sciences > C700 - Molecular biology, biophysics & biochemistry > C770 - Biophysical science
Divisions: Faculty of Biological Sciences > School of Biomedical Sciences
Faculty of Biological Sciences > Astbury Centre for Structural Molecular Biology
Related resources:
LocationType
https://doi.org/10.1021/jacs.5b08798Publication
https://doi.org/10.5518/151Dataset
License: Creative Commons Attribution 4.0 International (CC BY 4.0)
Date deposited: 16 Jun 2017 11:27
URI: https://archive.researchdata.leeds.ac.uk/id/eprint/158

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